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AlignAIR beta

Paste DNA sequence with A, C, G, T, or N. For multiple sequences, use FASTA headers that start with >. You can paste one record, press Enter, then paste another.

FASTA is supported. For multiple record, use FASTA format. Each record starts with >Header. Only A, C, G, T, or N are allowed in sequences.

⚠️ The Web interface supports up to 1000 sequences. For larger files, please use the CLI Tool

Supported formats: FASTA (.fasta, .fa), Text (.txt). Maximum 1000 sequences.
File Name:
Number of Sequences: 0

Alignment Parameters

Species, Chain Type & Model Selection
Species
Human immunoglobulin and T-cell receptor models
Chain Type
Model
Select the max number of assignments for each call
V Cap
D Cap
J Cap
Percentage for each allele assignment selection
V Threshold
D Threshold
J Threshold